1. M. Choua and Juan A. Bonachela, Ecological and evolutionary consequences of viral plasticity, to appear, The American Naturalist (2018).
  3. R. Martínez-García, C.D. Nadell, R. Hartmann, K. Drescher, and Juan A. Bonachela, Cell adhesion and fluid flow jointly initiate biofilm genetic structure, PLoS Comp. Biol. 14, e1006094 (2018).
  5. Juan A. Bonachela, M.T. Wortel, and N.C. Stenseth, Eco-evolutionary Red Queen dynamics regulate biodiversity in a metabolite-driven microbial system, Sci. Rep. 7, 17655 (2017).
  7. C.E. Tarnita*, Juan A. Bonachela*, E. Sheffer, J.A. Guyton, T.C. Coverdale, R.A. Long, and R.M. Pringle, A theoretical foundation for multi-scale regular vegetation patterns, Nature 541, 398 (2017). (*Joint 1st authors) (Cover article)
  9. N.S. Garcia, Juan A. Bonachela, and A.C. Martiny, Interactions between growth-dependent cell size, nutrient supply and cellular elemental stoichiometry of marine Synechococcus, ISME J. 10, 2715-2724 (2016).
  11. Juan A. Bonachela, C.A. Klausmeier, K.F. Edwards, E. Litchman, and S.A. Levin, The role of phytoplankton diversity in the emergent oceanic stoichiometry, J. Plankton Res. 38, 1021-1035 (2016).
  13. P. Villa, Juan A. Bonachela, S.A. Levin, and M.A. Muñoz, Eluding catastrophic shifts, PNAS Plus 112, E1828 (2015).
  15. Juan A. Bonachela, R.M. Pringle, E. Sheffer, T.C. Coverdale, J.A. Guyton, K.K. Caylor, S.A. Levin, and C.E. Tarnita, Termite mounds can increase the robustness of dryland ecosystems to climatic change, Science 345, 651 (2015). (Cover article)
  17. C. Mouginot, A.E. Zimmerman, Juan A. Bonachela, H. Fredricks, S.D. Allison, B.A.S. Van Mooy, and A.C. Martiny, Resource allocation by the marine cyanobacterium Synechococcus WH8102 in response to different nutrient supply ratios, Limnol.Oceanogr. 60, 1634-1641 (2015).
  19. M.W. Lomas, Juan A. Bonachela, S.A. Levin, and A.C. Martiny, Impact of ocean phytoplankton diversity on phosphate uptake, PNAS 111, 17540 (2014).
  21. A.F.A. Pellegrini, J.R. Watson, C.Torney, L. McManus, Juan A. Bonachela, C. Chang, and A.P. Dobson, Poaching and climate change: Interacting stochastic drivers of elephant population dynamics across Africa, under review (2018).
  23. Juan A. Bonachela and S.A. Levin, Evolutionary Comparison Between Viral Lysis Rate and Latent Period, J.Theor.Biol. 345, 32 (2014).
  25. P. Villa, Juan A. Bonachela and M.A. Muñoz, Quenched disorder forbids discontinuous transitions in non-equilibrium low-dimensional systems, Phys. Rev. E 89, 012145 (2014).
  27. Juan A. Bonachela, S.D. Allison, A.C. Martiny, and S.A. Levin, A model for variable phytoplankton stoichiometry based on cell protein regulation, Biogeosciences 10, 4341 (2013).
  29. S.A. Levin, Juan A. Bonachela, and C.D. Nadell, Mathematical and Computational Challenges in the Study of Complex Adaptive Microbial Systems, ``The Social Biology of Microbial Communities'' Institute of Medicine of the National Academies Workshop Summary Report, National Academies Press, USA (2012).
  31. Juan A. Bonachela, M.A. Muñoz, and S.A. Levin, Patchiness and Demographic Noise in Three Ecological Examples, J.Stat.Phys. 148, 723 (2012).
  33. Juan A. Bonachela, M. Raghib, and S.A. Levin, Acclimation or Starvation: Dynamic Model of Flexible Phytoplankton Nutrient Uptake, PNAS 108, 20633 (2011).
  35. M.A. Fortuna, Juan A. Bonachela, and S.A. Levin, Evolution of a Modular Software Network, PNAS 108, 19985 (2011).
  37. F. Vázquez, Juan A. Bonachela, C. López, and M.A. Muñoz, Temporal Griffiths Phases, Phys. Rev. Lett. 106, 235702 (2011).
  39. Juan A. Bonachela, C.D. Nadell, J.B. Xavier, S.A. Levin, Universality in Bacterial Colonies, J. Stat. Phys. 144, 303 (2011).
  41. Juan A. Bonachela, S. de Franciscis, J.J. Torres, and M.A. Muñoz, Self-Organization Without Conservation: Are Neuronal Avalanches Generically Critical?, J. Stat. Mech. P02015 (2010).
  43. Juan A. Bonachela and M.A. Muñoz, Self-Organization Without Conservation: True or Just Apparent Scale-Invariance?, J. Stat. Mech. P09009 (2009).
  45. A.C. Barato, C.E. Fiore, Juan A. Bonachela, H. Hinrichsen, and M. A. Muñoz, The Simplest Nonequilibrium Phase Transition into an Absorbing State, Phys. Rev. E 79, 041130 (2009).
  47. Juan A. Bonachela and M.A. Muñoz, Boundary-Induced Heterogeneous Absorbing States, in Modeling and Simulation of New Materials: Tenth Granada Lectures, Eds. P. L. Garrido, J. Marro and P. I. Hurtado, American Institute of Physics Conference Proceedings 1091, 204 (2009).
  49. Juan A. Bonachela, M. Alava, and M.A. Muñoz, Cusps, Self-Organization, and Absorbing States, Phys. Rev. E 79, R050106 (2009).
  51. Juan A. Bonachela and M.A. Muñoz, Confirming and Extending the Hypothesis of Universality in Sandpiles, Phys. Rev. E 78, 041102 (2008).
  53. Juan A. Bonachela, H. Hinrichsen, and M.A. Muñoz, Entropy Estimates of Small Data Sets, J. Phys. A 41, 202001 (2008).
  55. Juan A. Bonachela and M.A. Muñoz, How to discriminate easily between directed-percolation and Manna scaling , Physica A 384 89 (2007).
  57. Juan A. Bonachela, H. Chaté, I. Dornic, and M.A. Muñoz, Absorbing States and Elastic Interfaces in Random Media: Two Equivalent Descriptions of Self-Organized Criticality, Phys. Rev. Lett. 98, 155702 (2007).
  59. O. Al Hammal, Juan A. Bonachela, and M.A. Muñoz, Absorbing State Phase Transitions with a Non-Accessible Vacuum, J. Stat. Mech. P12007 (2006).
  61. Juan A. Bonachela, J. J. Ramasco, H. Chaté, I. Dornic, and M.A. Muñoz, Sticky Grains do not Change the Universality Class of Isotropic Sandpiles, Phys. Rev. E 74, 050102(R) (2006).